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    "getCCData",
    "getDAct",
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    "getDiveDeriv",
    "getDiveModel",
    "getDPhaseLab",
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    "getFileName",
    "getGAct",
    "getSpeed",
    "getSpeedCoef",
    "getTDR",
    "getTime",
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    "logit",
    "oneDiveStats",
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    "plotBoutsCDF",
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    "plotZOC",
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    "readTDR",
    "rmixexp",
    "rmsDistFilter",
    "rqPlot",
    "show",
    "speed<-",
    "stampDive",
    "timeBudget",
    "unLogit"
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      "file": "dives.csv",
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      "fields": [
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        "time",
        "depth",
        "light",
        "temperature",
        "speed"
      ],
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      "table": true,
      "tojson": true
    },
    {
      "name": "divesTDR",
      "title": "Sample of TDR data from a fur seal",
      "object": "divesTDR",
      "file": "divesTDR.RData",
      "class": [
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      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "divesTDRzoc",
      "title": "Sample of TDR data from a fur seal",
      "object": "divesTDRzoc",
      "file": "divesTDRzoc.RData",
      "class": [
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      ],
      "fields": [],
      "table": false,
      "tojson": false
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      "object": "sealLocs",
      "file": "sealLocs.csv",
      "class": [
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      ],
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        "time",
        "class",
        "lon",
        "lat"
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      "table": true,
      "tojson": true
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  "_help": [
    {
      "page": "diveMove-package",
      "title": "Dive Analysis and Calibration",
      "concept": [
        "time depth recorder",
        "Dive analysis"
      ],
      "topics": [
        "diveMove-package",
        "diveMove"
      ]
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    {
      "page": "dot-runquantile",
      "title": "Quantile of Moving Window",
      "concept": [
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        "moving maximum",
        "moving min",
        "moving minimum",
        "moving percentile",
        "moving quantile",
        "moving window",
        "rolling max",
        "rolling maximum",
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        "running quantile",
        "running window"
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      "page": "austFilter",
      "title": "Filter satellite locations",
      "topics": [
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        "grpSpeedFilter",
        "rmsDistFilter"
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    {
      "page": "boutsBEC",
      "title": "Calculate bout ending criteria from model coefficients",
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        "bec,mle-method",
        "bec,nls-method"
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    },
    {
      "page": "boutfreqs",
      "title": "Histogram of log-transformed frequencies",
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    {
      "page": "boutinit",
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      "topics": [
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        "boutinit,Bouts-method",
        "boutinit,data.frame-method"
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    {
      "page": "Bouts-class",
      "title": "Class \"Bouts\" for representing Poisson mixtures for identification of behavioural bouts",
      "topics": [
        "Bouts",
        "Bouts-class"
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    {
      "page": "boutsCDF",
      "title": "Estimated cumulative frequency for two- or three-process Poisson mixture models",
      "topics": [
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    {
      "page": "boutsNLSll",
      "title": "Generalized log likelihood function taking any number of Poisson processes in a \"broken-stick\" model",
      "topics": [
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        "boutsNLSll,Bouts-method",
        "boutsNLSll,numeric-method"
      ]
    },
    {
      "page": "calibrateDepth",
      "title": "Calibrate Depth and Generate a \"TDRcalibrate\" object",
      "topics": [
        "calibrateDepth"
      ]
    },
    {
      "page": "calibrateSpeed",
      "title": "Calibrate and build a \"TDRcalibrate\" object",
      "topics": [
        "calibrateSpeed"
      ]
    },
    {
      "page": "createTDR",
      "title": "Read comma-delimited file with \"TDR\" data",
      "topics": [
        "createTDR",
        "readTDR"
      ]
    },
    {
      "page": "distSpeed",
      "title": "Calculate distance and speed between locations",
      "topics": [
        "distSpeed"
      ]
    },
    {
      "page": "diveModel-class",
      "title": "Class \"diveModel\" for representing a model for identifying dive phases",
      "topics": [
        "diveModel",
        "diveModel-class"
      ]
    },
    {
      "page": "dives",
      "title": "Sample of TDR data from a fur seal",
      "topics": [
        "dives",
        "divesTDR",
        "divesTDRzoc"
      ]
    },
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      "source": "diveMove.Rmd",
      "filename": "diveMove.html",
      "title": "Diving Behaviour Analysis in R",
      "author": "Sebastián P. Luque",
      "engine": "knitr::rmarkdown",
      "headings": [
        "Features",
        "Preliminary Procedures",
        "Data Preparation",
        "TDR Data Representation",
        "Identification of Activities at Various Scales",
        "Calibrated TDR Data Representation",
        "Dive Summaries",
        "Calibrating Speed Sensor Readings",
        "Bout Detection",
        "Summary",
        "Acknowledgements",
        "References"
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      "created": "2020-09-08 16:50:25",
      "modified": "2021-02-22 20:28:24",
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